Pcsk1 snpspekerjaan

I am searching for an experienced bioinformatician who can competently map 15 Bos taurus whole genome sequences derived from different breeds (sourced from public repositories) to the Bos taurus reference genome. I also need a comprehensive detection process for all types of genomic variants (e.g. freeBayes). Notably, these will include: - Single Nucleotide Polymorphisms (SNPs) - Insertions and Deletions (InDels) - Structural Variants (SVs) Post sequence mapping and detection of these genomic variants, the identifier should move to annotate the variants for further study. Ideal Skills: - Working experience with Bos Taurus genome sequences - Proficient in mapping genome sequences to reference genomes - Expertise in detecting all types of genomic variants and robustly annotating ...

I am in the field of genetics and I have recently completed a whole genome sequencing of a cattle genome. The outcome is a vcf file which now needs to be examined. - Variant Annotation: I require comprehensive variant annotation for my vcf file. In particular, the focus should be on Single Nucleotide Polymorphisms (SNPs), Insertions and Deletions (Indels), and Copy Number Variations (CNVs). - Specific Information: The annotation should include gene names, protein consequences, and conservation scores. Experts in the field of bioinformatics who have prior experience with the VEP annotation tool will be ideal for this task. Profound understanding of genome sequencing and genetic variant is a must. Your work will be a cornerstone for my further research. So, an accurate and thoroug...

Unsere Aufgabe besteht darin, den wissenschaftlichen Hintergrund eines Sport- und Performance-Gentests zu überarbeiten. Hierbei geht es um die Prüfung und Aktualisierung der vorhandenen Literatur zu (Risiko)Aussagen von Single Nucleotide Polymorphisms (SNPs). Dabei bewerten wir auch die neuesten Studienergebnisse und überarbeiten bei Bedarf entsprechende Risiko(Aussagen). Wichtig! Arbeitssprache ist Deutsch! Bitte nur bei Level B1 CEFR Deutsch melden. Danke.

Hello! I have developed around 40% of a bGWAS proyect that I have to complete in around 1 month. I require help to finish my scripts, download the complete data and write my assay. I need someone that can help me with basic doubts and troubleshooting until I get the results. Basic pipeline of the proyect: 1. Download sequence from SRA 2. Quality control and trimming 3. Sequence mapping 4. SNPs calling, filtering 5. Treewas for GWAS Thanks

I have developed around 40% of a bGWAS proyect that I have to complete in around 1 month. I require help to finish my scripts, dowload the complete data and write my assay. I need someone that can help me with basic doubts and troubleshooting until i get the results. Basic pipeline of the proyect: 1. Download sequence from SRA 2. Quality control and trimming 3. Sequence mapping 4. SNPs calling, filtering 5. Treewas for annotation Thanks

...existing locations across India. Escalation management - track and drive resolution in a timely, proactive manner. close escalation. Manage customer escalations and coordinate resolution with key stakeholders (internal and external) by working cross-functionally to ensure client SLAs are met. Assembling the team responsible along with the Escalations Manager, Dispatchers, the FSE’s, Backend Support, sNPS Coordinator and all other partners in the areas of expertise in the escalation matrix and monitoring for timely closures thereby ensuring accurate and timely reporting of process performance to all stakeholders Reviewing processes and ensuring continuous improvement initiatives are run to help improve processes. Lead improvements by monitoring dashboards and emails to proac...

We have an internal project for 5G RAN FPGA design for DFE products: ...responsible for programming bitfiles into FPGA on multiple FPGA platforms · Timing Analysis – At least one Timing Analysis tools – Xilinx Vivado or Synopsys Primetime or Equivalent Cadence Tool. · DFT – Candidate must demonstrate knowledge of implementing Scan chain synthesis, ATPG ( Synopsys or Mentor NOT Cadence). MEMBIST and Logic BIST · Formal Verification – Minimum 2 years of Formal Verification – SNPS VC formal or Cadence Jasper Gold – RTL to Gates and Gates to Gates. · Deep knowledge of ASIC interfacing standards such as AXI-4, Wishbone. · Prior Experience with DRAM Interfacing is preferred · Employees are expected to be ...

...existing locations across India. Escalation management - track and drive resolution in a timely, proactive manner. close escalation. Manage customer escalations and coordinate resolution with key stakeholders (internal and external) by working cross-functionally to ensure client SLAs are met. Assembling the team responsible along with the Escalations Manager, Dispatchers, the FSE’s, Backend Support, sNPS Coordinator and all other partners in the areas of expertise in the escalation matrix and monitoring for timely closures thereby ensuring accurate and timely reporting of process performance to all stakeholders Reviewing processes and ensuring continuous improvement initiatives are run to help improve processes. Lead improvements by monitoring dashboards and emails to proac...

...issues; and document pertinent information to ensure continuity of care throughout till case closure, inform those that require escalation to the Escalation Manager for input/feedback. Define a complete road map for scoring high NPS for the business, ideate the complete strategy, implement and deliver NPS above other partners Work deeply with relevant stakeholders and lead the projects to the targeted sNPS scores Identifying customer needs and taking proactive steps to maintain positive experiences by aligning process improvements and redefining of the existing processes Evaluating customer feedback, documenting both customer compliments and complaints. Requirements: Excellent customer service instincts; prioritizes and champions customer delight Knowledge and proficiency in ...

Hi Mr. Gary N., I noticed your profile and would like to ask you if you are available to do a prediction model for 5 independent variables(genetic SNPs, genotypes) and one dependent variable with 1 and 0 (dissease/not dissease). I have quite small amount of data. I prefer R, but SPSS is also acceptable. We can further discuss over Webex. Regards, Miha (Slovenia)

Hi, my task are predict disease using SNPs data, are you able to help me develop ML model based on the data using Python language? Thanks!

Hi, my task are predict disease using SNPs data, are you able to help me develop ML model based on the data using Python language? Thanks!

Hi, my task are predict disease using SNPs data, are you able to help me develop ML model based on the data using Python language? Thanks!

Hi, my task are predict disease using SNPs data, are you able to help me develop ML model based on the data using Python language? Thanks!

Looking for expert in Molecular biology, genetics of obesity to write about the following topics: 1. Obesity (General information, risk factors, genetics): 2000-2500 words 2. Haplotypes in mitochondrial genomes and it's association with obesity (1000 -1500 words). Please specify your rate per 1000 words (otherwise your bid will be discarded) Please write mtDNA at the beginning of your bid

We are a genetic testing laboratory working with a human exome for the first time. We need help analysing the data. We will provide ...take this data and help us find clinically relevant variations. The person is thought to be generally healthy. The job includes: 1) Analyse Exome data (Bam files, fastaqc, bai, vcf available) for one humen exome. We need info such as clinically relevant mutations, carrier status etc. 2) The VCF gives us variatons that differ from the reference sequence only. We do however also need info which SNPs are wildtype. Give us a list of SNP rs numbers that were covered by the Exome (Not just the ones that differ from the reference data). Please DO NOT bid if you dont know what a BAM file or reference genome is. Many follow up projects are likely if thing...

based on genetic relationship between 5 psychiatric disorders estimated from genome wide SNPs

Scientific curator job will involve reviewing manuscripts about mtDNA SNPs and collect specific information from manuscript such as mutation, haplogroup, treatment, disease, conclusions, etc. Information from each manuscript need to be entered separately. Curator will have to review minimum 10 papers within 5 days of allocation. Selected curator would be first allocated with 10 manuscripts to review, which need to be completed with in 5 days with 100% accuracy. If those are finished on time with accuracy, then I will assign 10 more every 5th day. There is no minimum/maximum word count for the manuscript. Some manuscripts might have lot of information and some might have little, so you should have to be accurate and yet concise enter the main findings. In total there would be 40 to 4...

I need to analyse data stored in csv or similar files in a unique way. The cvs will contain arbitrary length, may be thousands of rows and columns. The analysis will be comparing colum by column with all rows taken into account or choosing specified group of rows at atime. The columns will contain only 4 letters and these 4 letters will be randomly repeated many times. ...The analysis required is comparing the similarities of each column (as a percentage) against the first column which is used as a reference column. The combining the second column with other columns pairwise and again comparing the resultant column against the reference column and classifying these comparisons and finding the one that is closest to the reference column. A very good example will be SNPs analysis in...

The job is to proofread the content of a website in English in the field of DNA Testing (will be sent in a Word file). There is biological and chemical terminology such as descriptions of diseases and SNPs, so I'm looking for a person with the appropriate background or experience. The proofread should consist of: - semantics - word order - punctuation - spelling I will send a small excerpt (~200 words) to those interested, in order to get familiar with the nature of the content. The file is 90724 words.

We need to design and do monthly the genetic reports for Genetic Health Risks, Carrier Status, Traits and wellness, ancestry... First design from our 700K SNPs array, and them prepare a system to make all reports automatic for 46 people batch every few weeks.

...people to choose the best one. The winner will get many more projects like this. So please quote for: ONE CHAPTER of scope BELOW one A4 page. We produce genetic testing programs based on currently available science (from pubmed) and we make it very simple to understand for end customers. All our claims do come from scientific studies and we do have the effect of every allele of certain SNPs on the body and the scientific studies where we got this information from. I would like to give you a report with the text written in simple language and the scientific papers the claims are based on and I would like you to write a scientific review type publication based on this information. No/little additional scientific research of publications will be required. In additi...

We are a genetic laboratory and we analyze human polymorphisms. We routinely have some publication search projects where we need someone who knows about genetics to do some literature search for...and fill out the excel for this. We will then check your results and use them for our reports. If this project goes well we have many such results to check and many mor researches like this to do. Here is an instructional video of what to do: Here is the Excel to fill in: see attachment Your offer is to research all SNPs you can find in ONE gene that are associated with the effect (or similar effects) we are looking for. You will find as many papers as possible for each SNP, but you can stop when you have 6 to 8.

Genetics/Bioinformaticvs only: I have certain human polymorphisms that I am interested in. In some cases tha structure of the DNA of this polymorphism makes it hard to analyze. In some cases neighboring polymorphisms are tightly linked to the polymorphism in question.... which could give me the chance of testing the neughboring polymorphism instead of the one i want....polymorphism makes it hard to analyze. In some cases neighboring polymorphisms are tightly linked to the polymorphism in question.... which could give me the chance of testing the neughboring polymorphism instead of the one i want.. and to deduce: if neughboring polymorphism = A, then my polymorphism = C Is there a resource on the web (NCBI or so) that can help me in determining if neighboring SNPs are l...

I need to read SNP data into R, compare separate files for relationship tests, check specific SNPs. Parentage testing, Likelihood of shared genes %, recombination Build relationship tree and estimate some population parameters distances based on GRM, FST, inbreeding, LD And I'd like it done today... if possible...

I need to read SNP data into R, compare separate files for relationship tests, check specific SNPs. Parentage testing, Likelihood of shared genes %, recombination Build relationship tree and estimate some population parameters distances based on GRM, FST, inbreeding, LD And I'd like it done today... if possible...

I am planning to create a (human) Genome Browser website, that allows people to browse through chromosomes, genes, SNPs, Mutations, etc. I have a developer team able to program it, I have the basic layout and functionalities planned and now It is time to begin. I have a number of talented Bioinformaticians in a discussion group via a Forum to give their inputs from a bioinformatics point of view. We will be scraping a lot of information from other websites and the pages must be SEO optimized (we will be having thousands to millions of content sites that must be Google optimized). I need an expert in SEO to consult us how to structure the website, how to choos google keyword optimized Heqaddings and optimize text for good searchability. I would start with a pay per hour s...

I am planning to create a (human) Genome Browser website, that allows people to browse through chromosomes, genes, SNPs, Mutations, etc. I have a developer team able to program it, I have the basic layout and functionalities planned and now It is time to begin. I have a number of talented Bioinformaticians in a discussion group via a Forum to give their inputs from a bioinformatics point of view. We will be scraping a lot of information from other websites and the pages must be SEO optimized (we will be having thousands to millions of content sites that must be Google optimized). I need an expert in SEO to consult us how to structure the website, how to choos google keyword optimized Heqaddings and optimize text for good searchability. I would start with a pay per hour s...

We need help to identify the most effective and cheapest method for genotyping a maximum of 40 mutations and SNPs. There is an opportunity for you to be hired as our freelancer for more jobs in this field in the near future.

Multiple Software Engineer positions (6 month contract) in bioinformatics are immediately available in the Department of Biostatistics and Computational Biology, University of Rochester School of Medicine and Dentistry, USA. The work involves the devel...(database and software development), Biology, Statistics, Math or other related fields. Additional knowledge and experience in bioinformatics databases and high-throughput omics data analysis are desirable. JAVA, Java Script, R, relational database, NoSQL database, natural language processing, text mining, data mining and machine learning as well as skills of DNA/RNA sequence data processing and SNPs calling are preferred. As a team player involved in multi-disciplinary research, strong interpersonal and communication skills are ess...

I am planning to create a (human) Genome Browser website, that allows people to browse through chromosomes, genes, SNPs, Mutations, etc. I have a developer team able to program it, I have the basic layout and functionalities planned and now It is time to begin. I have a number of talented Bioinformaticians in a discussion group via a Forum to give their inputs from a bioinformatics point of view. We will be scraping a lot of information from other websites and the pages must be SEO optimized (we will be having thousands to millions of content sites that must be Google optimized). I need an expert in SEO to consult us how to structure the website, how to choos google keyword optimized Heqaddings and optimize text for good searchability. I would start with a pay per hour s...

I am planning to create a (human) Genome Browser website, that allows people to browse through chromosomes, genes, SNPs, Mutations, etc. I have a developer team able to program it, I have the basic layout and functionalities planned and now It is time to begin. I want to have at least one talented Bioinformatician in a discussion group via a Forum or Skype to give his/her inputs from a bioinformatics point of view. I especially need help in getting access to open databases such as ENSEMBL, dbSNP and similar to allow my developers to scrape the genetic sequences off these sites and display them in our system. I am the project leader and a Biotechnologist with understanding of the genome and databases. What I do not know is how to gain access to these (open to the public and f...

I am planning to create a (human) Genome Browser website, that allows people to browse through chromosomes, genes, SNPs, Mutations, etc. I have a developer team able to program it, I have the basic layout and functionalities planned and now It is time to begin. I want to have at least one talented Bioinformatician in a discussion group via a Forum or Skype to give his/her inputs from a bioinformatics point of view. I especially need help in getting access to open databases such as ENSEMBL, dbSNP and similar to allow my developers to scrape the genetic sequences off these sites and display them in our system. I am the project leader and a Biotechnologist with understanding of the genome and databases. What I do not know is how to gain access to these (open to the public and f...

I am trying to convert VCF file (commonly used file format to display SNP information in bioinformatics) into the desired format. It shouldn't be too complex to write this script. VCF file is a file that contains SNPs (single nucleotide polymorphism) information. Basically, it is used to see which samples in population have single nucleotide variance in specific position of genome. Typical VCF file format looks like this: CHROM POS ID REF ALT QUAL FILTER INFO FORMAT SAMPLES There could be as many as hundreds of samples which stretches the number of columns to hundreds. Each sample will have its own column. Here is specifically what I am trying to do: The fourth column of VCF file is REF (stands for reference allele) and ALT (stands for alternate ...

I am a biotechnologist and I am working with genetic variations and odds ratios and relative risks of diseases inferred by genetic variations. I have a rough understanding of how a number of OR's can be combined but I have some questions I need to figure out through brain storming. This project is aiming at finding a Biotechnologist/Biostatician or similar who knows about odds ratios of SNPs and can help me in brain storming through an issue I have. I would write you the question I have and I would hope you can answer or brainstorm with me through this issue. Of course I will give perfect feedback even if the question can not be answered. When bidding, please state your educational / professional background.

This project will help people find value in their social network. SNPs or social networking points will be given to others for introductions via LinkedIn. This app will need to have a LinkedIn plugin and will reward points for introductions using a 5 point scale. There will be some sort of news feed as well showing what introductions have taken place. Skills 1. iPhone app development experience with at least 2 successful past project examples 2. Creative design and graphic development experience 3. Understanding of how to incorporate gamification into mobile apps Priorities: 1. Ease of use 2. Functionality 3. Gamification elements (points, ratings, peer comparisons)

...takes time to finish all the little details, in documentation, unit tests etc. And I am quite willing to pay for that. So this is not a case of somebody needing code that just works I am looking for making the code a thing of beauty in it's own right. What the code is actually doing is calculating epistatic interaction between mutations the traditional code scales quadratically with the number of SNPs (mutations) which are normally in the million range. This algorithm is heuristic sacrificing sensitivity for linear running speed. If you are interested and have the time let me know and I will prepare all the documentation and the code And quite frankly It would be fun to work with someone who is better than me at math and programming. My phd supervisor is a good man but ...

I'm looking for a scientific review on cancer-related databases. The first part should describe why databases are useful and why it helps to put them out there for the community to use. The second part enumerates particularly useful databases. These should be grouped into categories (e.g. microarray data, or SNPs, or epidemiological). Applications of each database should be provided. The third and final part of the paper looks at future applications that don't yet exist, as well as applications that may emerge from the integration of current existing databases. Target audience consists of clinical staff and researchers in the field of oncology. ## Deliverables IF YOU WANT TO BE SELECTED FOR THIS ASSIGNMENT: Please provide a list of 10 referenced resources that you...

Sila Dafter atau Log masuk untuk melihat butiran.

...directories so you are looking at all edit_dirs. Change the G to a P in the final column IF 1. If the SNP is called with only pb in column 5 and there are two ore more locations that are consecutive (column 3), all consecutive locations in that series should be changed to P. 2. If the SNP is called with pb and pp in column 5 and the the score for pp < 99, and there are 3 or more consecutive SNPs, all consecutive SNPs should be marked P. 3. For each position in column 3, open the * file and find the position in the first sequence listed by counting the numbers until you get there. i.e. >0_10024_01-1308_Pt- Quality Scores Forward and Reverse sequences 19 17 16 12 16 30 24 25 31 28 28 30 28 36 20 18 22 30 23 32 14 25 34 24 30 31 31 34 34 37 46 32 25 25 1 30 33 32 35 50 ...